IL_7OII_072

3D structure

PDB id

7OII (explore in PDB, NAKB, or RNA 3D Hub)

Description

CspA-70 cotranslational folding intermediate 2

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

UUAG*CGAAG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OII_072 not in the Motif Atlas

Homologous match to IL_5J7L_317

Geometric discrepancy: 0.1188

The information below is about IL_5J7L_317

Detailed Annotation

UAA/GAN variation

Broad Annotation

No text annotation

Motif group

IL_77691.5

Basepair signature

cWW-tSH-L-R-L-cWW

Number of instances in this motif group

7

Unit IDs

7OII|1|1|U|1864
7OII|1|1|U|1865
7OII|1|1|A|1866
7OII|1|1|G|1867
*
7OII|1|1|C|1874
7OII|1|1|G|1875
7OII|1|1|A|1876
7OII|1|1|A|1877
7OII|1|1|G|1878

Current chains

Chain 1

23S rRNA

Nearby chains