IL_7OII_092
3D structure
- PDB id
- 7OII (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CspA-70 cotranslational folding intermediate 2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- AUA*UGUUU
- Length
- 8 nucleotides
- Bulged bases
- 7OII|1|1|U|2491
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OII_092 not in the Motif Atlas
- Geometric match to IL_5J7L_337
- Geometric discrepancy: 0.0916
- The information below is about IL_5J7L_337
- Detailed Annotation
- Major groove minor groove platform with extra cWW
- Broad Annotation
- Major groove minor groove platform with extra cWW
- Motif group
- IL_51387.2
- Basepair signature
- cWW-cSH-cWW-cWW
- Number of instances in this motif group
- 20
Unit IDs
7OII|1|1|A|2459
7OII|1|1|U|2460
7OII|1|1|A|2461
*
7OII|1|1|U|2489
7OII|1|1|G|2490
7OII|1|1|U|2491
7OII|1|1|U|2492
7OII|1|1|U|2493
Current chains
- Chain 1
- 23S rRNA
Nearby chains
- Chain L
- 50S ribosomal protein L16
- Chain V
- 50S ribosomal protein L27
Coloring options: