IL_7OII_163

3D structure

PDB id

7OII (explore in PDB, NAKB, or RNA 3D Hub)

Description

CspA-70 cotranslational folding intermediate 2

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CUGC*GAGGAAG

Length

11 nucleotides

Bulged bases

7OII|1|2|U|1159

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OII_163 not in the Motif Atlas

Homologous match to IL_5J7L_053

Geometric discrepancy: 0.1126

The information below is about IL_5J7L_053

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_42032.1

Basepair signature

cWW-cSH-cWW-tWH-L-cWW-L-L

Number of instances in this motif group

2

Unit IDs

7OII|1|2|C|1158
7OII|1|2|U|1159
7OII|1|2|G|1160
7OII|1|2|C|1161
*
7OII|1|2|G|1175
7OII|1|2|A|1176
7OII|1|2|G|1177
7OII|1|2|G|1178
7OII|1|2|A|1179
7OII|1|2|A|1180
7OII|1|2|G|1181

Current chains

Chain 2

16S rRNA

Nearby chains

Chain f

30S ribosomal protein S2

Chain m

30S ribosomal protein S9