3D structure

PDB id
7OII (explore in PDB, NAKB, or RNA 3D Hub)
Description
CspA-70 cotranslational folding intermediate 2
Experimental method
ELECTRON MICROSCOPY
Resolution
3 Å

Loop

Sequence
AAUUC*GUUAU
Length
10 nucleotides
Bulged bases
7OII|1|1|U|846, 7OII|1|1|U|931
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7OII_184 not in the Motif Atlas
Homologous match to IL_5J7L_399
Geometric discrepancy: 0.1186
The information below is about IL_5J7L_399
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_96236.1
Basepair signature
cWW-tWW-cWW-L-cWW
Number of instances in this motif group
1

Unit IDs

7OII|1|1|A|844
7OII|1|1|A|845
7OII|1|1|U|846
7OII|1|1|U|847
7OII|1|1|C|848
*
7OII|1|1|G|930
7OII|1|1|U|931
7OII|1|1|U|932
7OII|1|1|A|933
7OII|1|1|U|934

Current chains

Chain 1
23S rRNA

Nearby chains

Chain Y
50S ribosomal protein L30

Coloring options:


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