IL_7OIZ_073

3D structure

PDB id

7OIZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 70S ribosome stalled with TnaC peptide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CCUGAAUC*GUGAG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OIZ_073 not in the Motif Atlas

Homologous match to IL_5J7L_253

Geometric discrepancy: 0.3932

The information below is about IL_5J7L_253

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_77870.1

Basepair signature

cWW-L-R-L-tHS-L-cWW-L-cWW

Number of instances in this motif group

2

Unit IDs

7OIZ|1|a|C|274
7OIZ|1|a|C|275
7OIZ|1|a|U|276
7OIZ|1|a|G|277
7OIZ|1|a|A|278
7OIZ|1|a|A|279
7OIZ|1|a|U|280
7OIZ|1|a|C|281
*
7OIZ|1|a|G|359
7OIZ|1|a|U|360
7OIZ|1|a|G|361
7OIZ|1|a|A|362
7OIZ|1|a|G|363

Current chains

Chain a

23S rRNA

Nearby chains