IL_7OJ0_073

3D structure

PDB id

7OJ0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 70S ribosome stalled with TnaC peptide and RF2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CCUGAAUC*GUGAG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OJ0_073 not in the Motif Atlas

Homologous match to IL_5J7L_253

Geometric discrepancy: 0.403

The information below is about IL_5J7L_253

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_77870.1

Basepair signature

cWW-L-R-L-tHS-L-cWW-L-cWW

Number of instances in this motif group

2

Unit IDs

7OJ0|1|a|C|274
7OJ0|1|a|C|275
7OJ0|1|a|U|276
7OJ0|1|a|G|277
7OJ0|1|a|A|278
7OJ0|1|a|A|279
7OJ0|1|a|U|280
7OJ0|1|a|C|281
*
7OJ0|1|a|G|359
7OJ0|1|a|U|360
7OJ0|1|a|G|361
7OJ0|1|a|A|362
7OJ0|1|a|G|363

Current chains

Chain a

23S rRNA

Nearby chains