IL_7OJ0_082

3D structure

PDB id

7OJ0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 70S ribosome stalled with TnaC peptide and RF2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

UU*GGA

Length

5 nucleotides

Bulged bases

7OJ0|1|a|G|729

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OJ0_082 not in the Motif Atlas

Geometric match to IL_4V9F_026

Geometric discrepancy: 0.0819

The information below is about IL_4V9F_026

Detailed Annotation

Single bulged G

Broad Annotation

No text annotation

Motif group

IL_00225.13

Basepair signature

cWW-L-cWW

Number of instances in this motif group

49

Unit IDs

7OJ0|1|a|U|702
7OJ0|1|a|U|703
*
7OJ0|1|a|G|728
7OJ0|1|a|G|729
7OJ0|1|a|A|730

Current chains

Chain a

23S rRNA

Nearby chains

Chain c

50S ribosomal protein L2