IL_7OJ0_180

3D structure

PDB id

7OJ0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 70S ribosome stalled with TnaC peptide and RF2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GAG*CUCC

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OJ0_180 not in the Motif Atlas

Homologous match to IL_9DFE_003

Geometric discrepancy: 0.3129

The information below is about IL_9DFE_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OJ0|1|a|G|43
7OJ0|1|a|A|44
7OJ0|1|a|G|45
*
7OJ0|1|a|C|433
7OJ0|1|a|U|434
7OJ0|1|a|C|435
7OJ0|1|a|C|436

Current chains

Chain a

23S rRNA

Nearby chains

Chain 1

50S ribosomal protein L34