IL_7OJ0_182

3D structure

PDB id

7OJ0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 70S ribosome stalled with TnaC peptide and RF2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

AAUUC*GUUAU

Length

10 nucleotides

Bulged bases

7OJ0|1|a|U|846, 7OJ0|1|a|U|931

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OJ0_182 not in the Motif Atlas

Geometric match to IL_5J7L_399

Geometric discrepancy: 0.3171

The information below is about IL_5J7L_399

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_96236.1

Basepair signature

cWW-tWW-cWW-L-cWW

Number of instances in this motif group

1

Unit IDs

7OJ0|1|a|A|844
7OJ0|1|a|A|845
7OJ0|1|a|U|846
7OJ0|1|a|U|847
7OJ0|1|a|C|848
*
7OJ0|1|a|G|930
7OJ0|1|a|U|931
7OJ0|1|a|U|932
7OJ0|1|a|A|933
7OJ0|1|a|U|934

Current chains

Chain a

23S rRNA

Nearby chains

Chain y

50S ribosomal protein L30