IL_7OLC_032

3D structure

PDB id

7OLC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermophilic eukaryotic 80S ribosome at idle POST state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GU*GGC

Length

5 nucleotides

Bulged bases

7OLC|1|1|G|842

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OLC_032 not in the Motif Atlas

Geometric match to IL_7A0S_017

Geometric discrepancy: 0.1594

The information below is about IL_7A0S_017

Detailed Annotation

Single bulged G

Broad Annotation

No text annotation

Motif group

IL_28408.2

Basepair signature

cWW-L-cWW

Number of instances in this motif group

69

Unit IDs

7OLC|1|1|G|815
7OLC|1|1|U|816
*
7OLC|1|1|G|841
7OLC|1|1|G|842
7OLC|1|1|C|843

Current chains

Chain 1

26S rRNA

Nearby chains

Chain LA

60S ribosomal protein L2-like protein

Chain LR

Ribosomal protein L19

Chain Lp

60S ribosomal protein L43-like protein