IL_7OLC_075

3D structure

PDB id

7OLC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermophilic eukaryotic 80S ribosome at idle POST state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GCA*UUC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OLC_075 not in the Motif Atlas

Geometric match to IL_7RQB_017

Geometric discrepancy: 0.1384

The information below is about IL_7RQB_017

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_86319.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

270

Unit IDs

7OLC|1|1|G|1655
7OLC|1|1|C|1656
7OLC|1|1|A|1657
*
7OLC|1|1|U|1671
7OLC|1|1|U|1672
7OLC|1|1|C|1673

Current chains

Chain 1

26S rRNA

Nearby chains

Chain LR

Ribosomal protein L19

Chain LU

60S ribosomal protein L22-like protein

Chain Lg

Ribosomal protein l34-like protein