IL_7OLC_100

3D structure

PDB id

7OLC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermophilic eukaryotic 80S ribosome at idle POST state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UAG*UGGG

Length

7 nucleotides

Bulged bases

7OLC|1|1|G|2565

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OLC_100 not in the Motif Atlas

Homologous match to IL_8C3A_100

Geometric discrepancy: 0.1224

The information below is about IL_8C3A_100

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_38958.10

Basepair signature

cWW-cWW-cWW-tHS

Number of instances in this motif group

9

Unit IDs

7OLC|1|1|U|2386
7OLC|1|1|A|2387
7OLC|1|1|G|2388
*
7OLC|1|1|U|2563
7OLC|1|1|G|2564
7OLC|1|1|G|2565
7OLC|1|1|G|2566

Current chains

Chain 1

26S rRNA

Nearby chains

Chain LA

60S ribosomal protein L2-like protein

Chain LN

Ribosomal protein L15

Chain Lo

60S ribosomal protein L44-like protein