IL_7OLC_103

3D structure

PDB id

7OLC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermophilic eukaryotic 80S ribosome at idle POST state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GG*CAC

Length

5 nucleotides

Bulged bases

7OLC|1|1|A|2585

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OLC_103 not in the Motif Atlas

Homologous match to IL_5TBW_098

Geometric discrepancy: 0.1274

The information below is about IL_5TBW_098

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_31462.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

127

Unit IDs

7OLC|1|1|G|2573
7OLC|1|1|G|2574
*
7OLC|1|1|C|2584
7OLC|1|1|A|2585
7OLC|1|1|C|2586

Current chains

Chain 1

26S rRNA

Nearby chains

Chain LI

60S ribosomal protein L10-like protein

Chain LT

60S ribosomal protein l21-like protein

Chain Lo

60S ribosomal protein L44-like protein