3D structure

PDB id
7OLC (explore in PDB, NAKB, or RNA 3D Hub)
Description
Thermophilic eukaryotic 80S ribosome at idle POST state
Experimental method
ELECTRON MICROSCOPY
Resolution
2.9 Å

Loop

Sequence
UAAGAAUAG*CUCGUA
Length
15 nucleotides
Bulged bases
7OLC|1|1|A|3134, 7OLC|1|1|A|3140
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7OLC|1|1|U|3133
7OLC|1|1|A|3134
7OLC|1|1|A|3135
7OLC|1|1|G|3136
7OLC|1|1|A|3137
7OLC|1|1|A|3138
7OLC|1|1|U|3139
7OLC|1|1|A|3140
7OLC|1|1|G|3141
*
7OLC|1|1|C|3150
7OLC|1|1|U|3151
7OLC|1|1|C|3152
7OLC|1|1|G|3153
7OLC|1|1|U|3154
7OLC|1|1|A|3155

Current chains

Chain 1
26S rRNA

Nearby chains

Chain LE
60S ribosomal protein L6
Chain LH
60S ribosomal protein l9-like protein
Chain LM
60S ribosomal protein L14-like protein
Chain LO
60S ribosomal protein L16-like protein
Chain LS
60S ribosomal protein L20

Coloring options:

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