IL_7OLC_139
3D structure
- PDB id
- 7OLC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Thermophilic eukaryotic 80S ribosome at idle POST state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- AGAG*CGAU
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OLC_139 not in the Motif Atlas
- Geometric match to IL_4V9F_100
- Geometric discrepancy: 0.1949
- The information below is about IL_4V9F_100
- Detailed Annotation
- Double sheared
- Broad Annotation
- Double sheared
- Motif group
- IL_58355.2
- Basepair signature
- cWW-tSH-tHS-cWW
- Number of instances in this motif group
- 43
Unit IDs
7OLC|1|1|A|3283
7OLC|1|1|G|3284
7OLC|1|1|A|3285
7OLC|1|1|G|3286
*
7OLC|1|1|C|3301
7OLC|1|1|G|3302
7OLC|1|1|A|3303
7OLC|1|1|U|3304
Current chains
- Chain 1
- 26S rRNA
Nearby chains
- Chain LR
- Ribosomal protein L19
- Chain LU
- 60S ribosomal protein L22-like protein
- Chain SI
- 40S ribosomal protein S8
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