IL_7OLC_157

3D structure

PDB id

7OLC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermophilic eukaryotic 80S ribosome at idle POST state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CUAUCAA*UGACAACGG

Length

16 nucleotides

Bulged bases

7OLC|1|2|U|310, 7OLC|1|2|C|348

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OLC|1|2|C|307
7OLC|1|2|U|308
7OLC|1|2|A|309
7OLC|1|2|U|310
7OLC|1|2|C|311
7OLC|1|2|A|312
7OLC|1|2|A|313
*
7OLC|1|2|U|345
7OLC|1|2|G|346
7OLC|1|2|A|347
7OLC|1|2|C|348
7OLC|1|2|A|349
7OLC|1|2|A|350
7OLC|1|2|C|351
7OLC|1|2|G|352
7OLC|1|2|G|353

Current chains

Chain 2

18S rRNA

Nearby chains

Chain 1

Large subunit ribosomal RNA; LSU rRNA

Chain SI

40S ribosomal protein S8

Chain SL

40S ribosomal protein S11-like protein

Chain SX

40S ribosomal protein s23-like protein