IL_7OLC_158
3D structure
- PDB id
- 7OLC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Thermophilic eukaryotic 80S ribosome at idle POST state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UUUCGA*UG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OLC_158 not in the Motif Atlas
- Homologous match to IL_4V88_403
- Geometric discrepancy: 0.4075
- The information below is about IL_4V88_403
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_85724.1
- Basepair signature
- cWW-L-cWW-L-L-R
- Number of instances in this motif group
- 2
Unit IDs
7OLC|1|2|U|315
7OLC|1|2|U|316
7OLC|1|2|U|317
7OLC|1|2|C|318
7OLC|1|2|G|319
7OLC|1|2|A|320
*
7OLC|1|2|U|342
7OLC|1|2|G|343
Current chains
- Chain 2
- 18S rRNA
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain LR
- Ribosomal protein L19
- Chain SI
- 40S ribosomal protein S8
- Chain SL
- 40S ribosomal protein S11-like protein
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