IL_7OLC_237

3D structure

PDB id

7OLC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermophilic eukaryotic 80S ribosome at idle POST state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

AGC*GCGUUGU

Length

10 nucleotides

Bulged bases

7OLC|1|1|U|143

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OLC|1|1|A|124
7OLC|1|1|G|125
7OLC|1|1|C|126
*
7OLC|1|1|G|139
7OLC|1|1|C|140
7OLC|1|1|G|141
7OLC|1|1|U|142
7OLC|1|1|U|143
7OLC|1|1|G|144
7OLC|1|1|U|145

Current chains

Chain 1

26S rRNA

Nearby chains

Chain 4

5.8S ribosomal RNA; 5.8S rRNA

Chain LG

60S ribosomal protein L8

Chain LN

Ribosomal protein L15

Chain Lh

Dolichyl-diphosphooligosaccharide--protein glycotransferase