IL_7OLC_247

3D structure

PDB id

7OLC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermophilic eukaryotic 80S ribosome at idle POST state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

AUUAGG*CAUUCU

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OLC|1|1|A|988
7OLC|1|1|U|989
7OLC|1|1|U|990
7OLC|1|1|A|991
7OLC|1|1|G|992
7OLC|1|1|G|993
*
7OLC|1|1|C|1022
7OLC|1|1|A|1023
7OLC|1|1|U|1024
7OLC|1|1|U|1025
7OLC|1|1|C|1026
7OLC|1|1|U|1027

Current chains

Chain 1

26S rRNA

Nearby chains

Chain 3

5S ribosomal RNA; 5S rRNA

Chain C

Ribosome-associated molecular chaperone SSB1

Chain LD

60S ribosomal protein l5-like protein

Chain LI

60S ribosomal protein L10-like protein