3D structure

PDB id
7OLC (explore in PDB, NAKB, or RNA 3D Hub)
Description
Thermophilic eukaryotic 80S ribosome at idle POST state
Experimental method
ELECTRON MICROSCOPY
Resolution
2.9 Å

Loop

Sequence
UUAAGG*CCCAUA
Length
12 nucleotides
Bulged bases
7OLC|1|1|U|1314
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7OLC|1|1|U|1150
7OLC|1|1|U|1151
7OLC|1|1|A|1152
7OLC|1|1|A|1153
7OLC|1|1|G|1154
7OLC|1|1|G|1155
*
7OLC|1|1|C|1310
7OLC|1|1|C|1311
7OLC|1|1|C|1312
7OLC|1|1|A|1313
7OLC|1|1|U|1314
7OLC|1|1|A|1315

Current chains

Chain 1
26S rRNA

Nearby chains

Chain 3
5S ribosomal RNA; 5S rRNA
Chain LF
60S ribosomal protein l7-like protein
Chain LQ
Ribosomal protein L18-like protein
Chain Le
60S ribosomal protein L32-like protein
Chain Lf
60S ribosomal protein l33-like protein

Coloring options:

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