IL_7OLC_253
3D structure
- PDB id
- 7OLC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Thermophilic eukaryotic 80S ribosome at idle POST state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GUGG*CCC
- Length
- 7 nucleotides
- Bulged bases
- 7OLC|1|1|U|1164
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OLC_253 not in the Motif Atlas
- Geometric match to IL_5ED2_004
- Geometric discrepancy: 0.1985
- The information below is about IL_5ED2_004
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- Isolated non-canonical cWW pair
- Motif group
- IL_44258.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 301
Unit IDs
7OLC|1|1|G|1163
7OLC|1|1|U|1164
7OLC|1|1|G|1165
7OLC|1|1|G|1166
*
7OLC|1|1|C|1306
7OLC|1|1|C|1307
7OLC|1|1|C|1308
Current chains
- Chain 1
- 26S rRNA
Nearby chains
- Chain LF
- 60S ribosomal protein l7-like protein
- Chain LM
- 60S ribosomal protein L14-like protein
- Chain LO
- 60S ribosomal protein L16-like protein
- Chain LS
- 60S ribosomal protein L20
- Chain Lf
- 60S ribosomal protein l33-like protein
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