3D structure

PDB id
7OLC (explore in PDB, NAKB, or RNA 3D Hub)
Description
Thermophilic eukaryotic 80S ribosome at idle POST state
Experimental method
ELECTRON MICROSCOPY
Resolution
2.9 Å

Loop

Sequence
AGACG*CCCUUGAAAAU
Length
16 nucleotides
Bulged bases
7OLC|1|1|C|1773, 7OLC|1|1|U|1774
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7OLC|1|1|A|1634
7OLC|1|1|G|1635
7OLC|1|1|A|1636
7OLC|1|1|C|1637
7OLC|1|1|G|1638
*
7OLC|1|1|C|1771
7OLC|1|1|C|1772
7OLC|1|1|C|1773
7OLC|1|1|U|1774
7OLC|1|1|U|1775
7OLC|1|1|G|1776
7OLC|1|1|A|1777
7OLC|1|1|A|1778
7OLC|1|1|A|1779
7OLC|1|1|A|1780
7OLC|1|1|U|1781

Current chains

Chain 1
26S rRNA

Nearby chains

Chain LA
60S ribosomal protein L2-like protein
Chain Lg
Ribosomal protein l34-like protein
Chain Lp
60S ribosomal protein L43-like protein
Chain Lr
60S ribosomal protein L41-A

Coloring options:

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