3D structure

PDB id
7OLC (explore in PDB, NAKB, or RNA 3D Hub)
Description
Thermophilic eukaryotic 80S ribosome at idle POST state
Experimental method
ELECTRON MICROSCOPY
Resolution
2.9 Å

Loop

Sequence
UAC*GUAAG
Length
8 nucleotides
Bulged bases
7OLC|1|1|A|2870
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7OLC|1|1|U|2850
7OLC|1|1|A|2851
7OLC|1|1|C|2852
*
7OLC|1|1|G|2867
7OLC|1|1|U|2868
7OLC|1|1|A|2869
7OLC|1|1|A|2870
7OLC|1|1|G|2871

Current chains

Chain 1
26S rRNA

Nearby chains

Chain LH
60S ribosomal protein l9-like protein
Chain LO
60S ribosomal protein L16-like protein
Chain Lm
Ubiquitin

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.0882 s