IL_7OLC_281
3D structure
- PDB id
- 7OLC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Thermophilic eukaryotic 80S ribosome at idle POST state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GUCU*AGC
- Length
- 7 nucleotides
- Bulged bases
- 7OLC|1|2|U|555
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OLC_281 not in the Motif Atlas
- Geometric match to IL_4WF9_083
- Geometric discrepancy: 0.2263
- The information below is about IL_4WF9_083
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_01003.3
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 214
Unit IDs
7OLC|1|2|G|554
7OLC|1|2|U|555
7OLC|1|2|C|556
7OLC|1|2|U|557
*
7OLC|1|2|A|582
7OLC|1|2|G|583
7OLC|1|2|C|584
Current chains
- Chain 2
- 18S rRNA
Nearby chains
- Chain B
- HABP4_PAI-RBP1 domain-containing protein
- Chain SD
- 40S ribosomal protein S3-like protein
- Chain SX
- 40S ribosomal protein s23-like protein
- Chain Se
- 40S ribosomal protein S30
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