IL_7OLC_282

3D structure

PDB id

7OLC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermophilic eukaryotic 80S ribosome at idle POST state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GAACAAAUUA*UACAUUAGC

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OLC|1|2|G|750
7OLC|1|2|A|751
7OLC|1|2|A|752
7OLC|1|2|C|753
7OLC|1|2|A|754
7OLC|1|2|A|755
7OLC|1|2|A|756
7OLC|1|2|U|757
7OLC|1|2|U|758
7OLC|1|2|A|759
*
7OLC|1|2|U|788
7OLC|1|2|A|789
7OLC|1|2|C|790
7OLC|1|2|A|791
7OLC|1|2|U|792
7OLC|1|2|U|793
7OLC|1|2|A|794
7OLC|1|2|G|795
7OLC|1|2|C|796

Current chains

Chain 2

18S rRNA

Nearby chains

Chain SE

40S ribosomal protein S4

Chain SJ

40S ribosomal protein s9-like protein

Chain SL

40S ribosomal protein S11-like protein

Chain SW

40S ribosomal protein S22-like protein