IL_7OLC_287

3D structure

PDB id

7OLC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermophilic eukaryotic 80S ribosome at idle POST state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GGGGAUC*GUCU

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OLC|1|2|G|982
7OLC|1|2|G|983
7OLC|1|2|G|984
7OLC|1|2|G|985
7OLC|1|2|A|986
7OLC|1|2|U|987
7OLC|1|2|C|988
*
7OLC|1|2|G|1012
7OLC|1|2|U|1013
7OLC|1|2|C|1014
7OLC|1|2|U|1015

Current chains

Chain 2

18S rRNA

Nearby chains

Chain 1

Large subunit ribosomal RNA; LSU rRNA

Chain LA

60S ribosomal protein L2-like protein

Chain Lp

60S ribosomal protein L43-like protein

Chain SN

40S ribosomal protein S13-like protein

Chain SO

40S ribosomal protein S14-like protein

Chain Sa

40S ribosomal protein S26