IL_7OLC_302

3D structure

PDB id

7OLC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermophilic eukaryotic 80S ribosome at idle POST state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CAGAGAG*CACUCAG

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OLC|1|2|C|1684
7OLC|1|2|A|1685
7OLC|1|2|G|1686
7OLC|1|2|A|1687
7OLC|1|2|G|1688
7OLC|1|2|A|1689
7OLC|1|2|G|1690
*
7OLC|1|2|C|1703
7OLC|1|2|A|1704
7OLC|1|2|C|1705
7OLC|1|2|U|1706
7OLC|1|2|C|1707
7OLC|1|2|A|1708
7OLC|1|2|G|1709

Current chains

Chain 2

18S rRNA

Nearby chains

Chain LW

60S ribosomal protein L24-like protein

Chain SG

40S ribosomal protein S6