IL_7OLC_304
3D structure
- PDB id
- 7OLC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Thermophilic eukaryotic 80S ribosome at idle POST state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GAUCCC*GCUCUC
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OLC_304 not in the Motif Atlas
- Homologous match to IL_7A0S_105
- Geometric discrepancy: 0.3931
- The information below is about IL_7A0S_105
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_93630.2
- Basepair signature
- cWW-L-R-L-cWW-L-L
- Number of instances in this motif group
- 4
Unit IDs
7OLC|1|3|G|31
7OLC|1|3|A|32
7OLC|1|3|U|33
7OLC|1|3|C|34
7OLC|1|3|C|35
7OLC|1|3|C|36
*
7OLC|1|3|G|41
7OLC|1|3|C|42
7OLC|1|3|U|43
7OLC|1|3|C|44
7OLC|1|3|U|45
7OLC|1|3|C|46
Current chains
- Chain 3
- 5S rRNA
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain LD
- 60S ribosomal protein l5-like protein
- Chain LJ
- Putative ribosomal protein
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