IL_7OLC_305
3D structure
- PDB id
- 7OLC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Thermophilic eukaryotic 80S ribosome at idle POST state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- AGGUC*GACU
- Length
- 9 nucleotides
- Bulged bases
- 7OLC|1|3|U|85
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OLC_305 not in the Motif Atlas
- Geometric match to IL_5TBW_504
- Geometric discrepancy: 0.2615
- The information below is about IL_5TBW_504
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_25872.2
- Basepair signature
- cWW-cWW-cWH-cWW
- Number of instances in this motif group
- 6
Unit IDs
7OLC|1|3|A|82
7OLC|1|3|G|83
7OLC|1|3|G|84
7OLC|1|3|U|85
7OLC|1|3|C|86
*
7OLC|1|3|G|93
7OLC|1|3|A|94
7OLC|1|3|C|95
7OLC|1|3|U|96
Current chains
- Chain 3
- 5S rRNA
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain LF
- 60S ribosomal protein l7-like protein
- Chain LI
- 60S ribosomal protein L10-like protein
- Chain LS
- 60S ribosomal protein L20
Coloring options: