IL_7OLD_059
3D structure
- PDB id
- 7OLD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GUGGC*GAAUC
- Length
- 10 nucleotides
- Bulged bases
- 7OLD|1|1|G|1219
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OLD_059 not in the Motif Atlas
- Homologous match to IL_8C3A_058
- Geometric discrepancy: 0.3806
- The information below is about IL_8C3A_058
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_30542.5
- Basepair signature
- cWW-L-R-L-R-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
7OLD|1|1|G|1217
7OLD|1|1|U|1218
7OLD|1|1|G|1219
7OLD|1|1|G|1220
7OLD|1|1|C|1221
*
7OLD|1|1|G|1233
7OLD|1|1|A|1234
7OLD|1|1|A|1235
7OLD|1|1|U|1236
7OLD|1|1|C|1237
Current chains
- Chain 1
- 26S rRNA
Nearby chains
- Chain LK
- 60S ribosomal protein L12-like protein
- Chain Ls
- 60S acidic ribosomal protein P0
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