IL_7OLD_063
3D structure
- PDB id
- 7OLD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- UGACGAAG*UCGAA
- Length
- 13 nucleotides
- Bulged bases
- 7OLD|1|1|C|1374
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OLD_063 not in the Motif Atlas
- Homologous match to IL_5TBW_059
- Geometric discrepancy: 0.1247
- The information below is about IL_5TBW_059
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_70923.5
- Basepair signature
- cWW-cWW-tSS-tSH-tHS-cWW-tHS
- Number of instances in this motif group
- 32
Unit IDs
7OLD|1|1|U|1371
7OLD|1|1|G|1372
7OLD|1|1|A|1373
7OLD|1|1|C|1374
7OLD|1|1|G|1375
7OLD|1|1|A|1376
7OLD|1|1|A|1377
7OLD|1|1|G|1378
*
7OLD|1|1|U|1398
7OLD|1|1|C|1399
7OLD|1|1|G|1400
7OLD|1|1|A|1401
7OLD|1|1|A|1402
Current chains
- Chain 1
- 26S rRNA
Nearby chains
- Chain 4
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain LC
- 60S ribosomal protein L4-like protein
- Chain LP
- 60S ribosomal protein l17-like protein
- Chain LY
- 60S ribosomal protein L26-like protein
- Chain Le
- 60S ribosomal protein L32-like protein
Coloring options: