IL_7OLD_089

3D structure

PDB id

7OLD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GGGCAC*GCGGUUAAC

Length

15 nucleotides

Bulged bases

7OLD|1|1|A|2055

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OLD|1|1|G|1932
7OLD|1|1|G|1933
7OLD|1|1|G|1934
7OLD|1|1|C|1935
7OLD|1|1|A|1936
7OLD|1|1|C|1937
*
7OLD|1|1|G|2049
7OLD|1|1|C|2050
7OLD|1|1|G|2051
7OLD|1|1|G|2052
7OLD|1|1|U|2053
7OLD|1|1|U|2054
7OLD|1|1|A|2055
7OLD|1|1|A|2056
7OLD|1|1|C|2057

Current chains

Chain 1

26S rRNA

Nearby chains

Chain LR

Ribosomal protein L19

Chain SL

40S ribosomal protein S11-like protein