IL_7OLD_136

3D structure

PDB id

7OLD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

AUUCCUC*GUAAUU

Length

13 nucleotides

Bulged bases

7OLD|1|1|C|3172, 7OLD|1|1|A|3200

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OLD|1|1|A|3168
7OLD|1|1|U|3169
7OLD|1|1|U|3170
7OLD|1|1|C|3171
7OLD|1|1|C|3172
7OLD|1|1|U|3173
7OLD|1|1|C|3174
*
7OLD|1|1|G|3198
7OLD|1|1|U|3199
7OLD|1|1|A|3200
7OLD|1|1|A|3201
7OLD|1|1|U|3202
7OLD|1|1|U|3203

Current chains

Chain 1

26S rRNA

Nearby chains

Chain LE

60S ribosomal protein L6

Chain LM

60S ribosomal protein L14-like protein

Chain Lf

60S ribosomal protein l33-like protein