IL_7OLD_164

3D structure

PDB id

7OLD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CUAUCAA*UGACAACGG

Length

16 nucleotides

Bulged bases

7OLD|1|2|U|310, 7OLD|1|2|C|348

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OLD|1|2|C|307
7OLD|1|2|U|308
7OLD|1|2|A|309
7OLD|1|2|U|310
7OLD|1|2|C|311
7OLD|1|2|A|312
7OLD|1|2|A|313
*
7OLD|1|2|U|345
7OLD|1|2|G|346
7OLD|1|2|A|347
7OLD|1|2|C|348
7OLD|1|2|A|349
7OLD|1|2|A|350
7OLD|1|2|C|351
7OLD|1|2|G|352
7OLD|1|2|G|353

Current chains

Chain 2

18S rRNA

Nearby chains

Chain SI

40S ribosomal protein S8

Chain SL

40S ribosomal protein S11-like protein

Chain SX

40S ribosomal protein s23-like protein