IL_7OLD_264

3D structure

PDB id

7OLD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GGAGUAUGG*CUGAAAC

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OLD|1|2|G|1108
7OLD|1|2|G|1109
7OLD|1|2|A|1110
7OLD|1|2|G|1111
7OLD|1|2|U|1112
7OLD|1|2|A|1113
7OLD|1|2|U|1114
7OLD|1|2|G|1115
7OLD|1|2|G|1116
*
7OLD|1|2|C|1125
7OLD|1|2|U|1126
7OLD|1|2|G|1127
7OLD|1|2|A|1128
7OLD|1|2|A|1129
7OLD|1|2|A|1130
7OLD|1|2|C|1131

Current chains

Chain 2

18S rRNA

Nearby chains

Chain 1

Large subunit ribosomal RNA; LSU rRNA

Chain Ln

60S ribosomal protein L41-A

Chain SX

40S ribosomal protein s23-like protein