IL_7OPE_044

3D structure

PDB id

7OPE (explore in PDB, NAKB, or RNA 3D Hub)

Description

RqcH DR variant bound to 50S-peptidyl-tRNA-RqcP RQC complex (rigid body refinement)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GAGUG*CUC

Length

8 nucleotides

Bulged bases

7OPE|1|A|A|1134

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OPE_044 not in the Motif Atlas

Homologous match to IL_7RQB_044

Geometric discrepancy: 0.2412

The information below is about IL_7RQB_044

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OPE|1|A|G|1133
7OPE|1|A|A|1134
7OPE|1|A|G|1135
7OPE|1|A|U|1136
7OPE|1|A|G|1137
*
7OPE|1|A|C|1146
7OPE|1|A|U|1147
7OPE|1|A|C|1148

Current chains

Chain A

23S rRNA

Nearby chains

Chain K

50S ribosomal protein L11

Chain j

50S ribosomal protein L36