IL_7OPE_053
3D structure
- PDB id
- 7OPE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- RqcH DR variant bound to 50S-peptidyl-tRNA-RqcP RQC complex (rigid body refinement)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CGAGG*CGUAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OPE_053 not in the Motif Atlas
- Homologous match to IL_5J7L_293
- Geometric discrepancy: 0.1341
- The information below is about IL_5J7L_293
- Detailed Annotation
- tSH-tHW-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_17136.7
- Basepair signature
- cWW-tSH-tHW-tHS-cWW
- Number of instances in this motif group
- 14
Unit IDs
7OPE|1|A|C|1396
7OPE|1|A|G|1397
7OPE|1|A|A|1398
7OPE|1|A|G|1399
7OPE|1|A|G|1400
*
7OPE|1|A|C|1409
7OPE|1|A|G|1410
7OPE|1|A|U|1411
7OPE|1|A|A|1412
7OPE|1|A|G|1413
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain E
- 50S ribosomal protein L2
- Chain b
- 50S ribosomal protein L28
- Chain h
- 50S ribosomal protein L34
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