IL_7OPE_078

3D structure

PDB id

7OPE (explore in PDB, NAKB, or RNA 3D Hub)

Description

RqcH DR variant bound to 50S-peptidyl-tRNA-RqcP RQC complex (rigid body refinement)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UUAG*CGAAG

Length

9 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OPE_078 not in the Motif Atlas

Homologous match to IL_5J7L_317

Geometric discrepancy: 0.1245

The information below is about IL_5J7L_317

Detailed Annotation

UAA/GAN related

Broad Annotation

No text annotation

Motif group

IL_77691.5

Basepair signature

cWW-tSH-L-R-L-cWW

Number of instances in this motif group

7

Unit IDs

7OPE|1|A|U|1893
7OPE|1|A|U|1894
7OPE|1|A|A|1895
7OPE|1|A|G|1896
*
7OPE|1|A|C|1903
7OPE|1|A|G|1904
7OPE|1|A|A|1905
7OPE|1|A|A|1906
7OPE|1|A|G|1907

Current chains

Chain A

23S rRNA

Nearby chains