IL_7OPE_118

3D structure

PDB id

7OPE (explore in PDB, NAKB, or RNA 3D Hub)

Description

RqcH DR variant bound to 50S-peptidyl-tRNA-RqcP RQC complex (rigid body refinement)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GG*UAC

Length

5 nucleotides

Bulged bases

7OPE|1|A|A|943

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OPE_118 not in the Motif Atlas

Geometric match to IL_8B0X_002

Geometric discrepancy: 0.3974

The information below is about IL_8B0X_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_14190.2

Basepair signature

cWW-L-cWW

Number of instances in this motif group

160

Unit IDs

7OPE|1|A|G|927
7OPE|1|A|G|928
*
7OPE|1|A|U|942
7OPE|1|A|A|943
7OPE|1|A|C|944

Current chains

Chain A

23S rRNA

Nearby chains