IL_7OT5_009

3D structure

PDB id

7OT5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

CspA-70 cotranslational folding intermediate 1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CCUGAAUC*GUGAG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OT5_009 not in the Motif Atlas

Homologous match to IL_5J7L_253

Geometric discrepancy: 0.2757

The information below is about IL_5J7L_253

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_77870.1

Basepair signature

cWW-L-R-L-tHS-L-cWW-L-cWW

Number of instances in this motif group

2

Unit IDs

7OT5|1|1|C|274
7OT5|1|1|C|275
7OT5|1|1|U|276
7OT5|1|1|G|277
7OT5|1|1|A|278
7OT5|1|1|A|279
7OT5|1|1|U|280
7OT5|1|1|C|281
*
7OT5|1|1|G|359
7OT5|1|1|U|360
7OT5|1|1|G|361
7OT5|1|1|A|362
7OT5|1|1|G|363

Current chains

Chain 1

23S rRNA

Nearby chains