3D structure

PDB id
7OT5 (explore in PDB, NAKB, or RNA 3D Hub)
Description
CspA-70 cotranslational folding intermediate 1
Experimental method
ELECTRON MICROSCOPY
Resolution
2.9 Å

Loop

Sequence
UUU*AUG
Length
6 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7OT5_028 not in the Motif Atlas
Homologous match to IL_5J7L_273
Geometric discrepancy: 0.1919
The information below is about IL_5J7L_273
Detailed Annotation
Isolated non-canonical cWW pair
Broad Annotation
No text annotation
Motif group
IL_28037.2
Basepair signature
cWW-cWW-cWW
Number of instances in this motif group
65

Unit IDs

7OT5|1|1|U|870
7OT5|1|1|U|871
7OT5|1|1|U|872
*
7OT5|1|1|A|905
7OT5|1|1|U|906
7OT5|1|1|G|907

Current chains

Chain 1
23S rRNA

Nearby chains

Chain L
50S ribosomal protein L16
Chain z
Transfer RNA; tRNA

Coloring options:


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