IL_7OTC_085

3D structure

PDB id

7OTC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an Escherichia coli 70S ribosome in complex with elongation factor G and the antibiotic Argyrin B

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GUGUAGG*CUUGAAAUACCACCC

Length

22 nucleotides

Bulged bases

7OTC|1|A|U|2111, 7OTC|1|A|G|2112, 7OTC|1|A|U|2172

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OTC|1|A|G|2110
7OTC|1|A|U|2111
7OTC|1|A|G|2112
7OTC|1|A|U|2113
7OTC|1|A|A|2114
7OTC|1|A|G|2115
7OTC|1|A|G|2116
*
7OTC|1|A|C|2165
7OTC|1|A|U|2166
7OTC|1|A|U|2167
7OTC|1|A|G|2168
7OTC|1|A|A|2169
7OTC|1|A|A|2170
7OTC|1|A|A|2171
7OTC|1|A|U|2172
7OTC|1|A|A|2173
7OTC|1|A|C|2174
7OTC|1|A|C|2175
7OTC|1|A|A|2176
7OTC|1|A|C|2177
7OTC|1|A|C|2178
7OTC|1|A|C|2179

Current chains

Chain A

23S ribosomal RNA

Nearby chains