3D structure

PDB id
7OTC (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of an Escherichia coli 70S ribosome in complex with elongation factor G and the antibiotic Argyrin B
Experimental method
ELECTRON MICROSCOPY
Resolution
2.9 Å

Loop

Sequence
UACAAAGA*UCAUAAAG
Length
16 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7OTC|1|a|U|1247
7OTC|1|a|A|1248
7OTC|1|a|C|1249
7OTC|1|a|A|1250
7OTC|1|a|A|1251
7OTC|1|a|A|1252
7OTC|1|a|G|1253
7OTC|1|a|A|1254
*
7OTC|1|a|U|1283
7OTC|1|a|C|1284
7OTC|1|a|A|1285
7OTC|1|a|U|1286
7OTC|1|a|A|1287
7OTC|1|a|A|1288
7OTC|1|a|A|1289
7OTC|1|a|G|1290

Current chains

Chain a
16S ribosomal RNA

Nearby chains

Chain c
30S ribosomal protein S3
Chain g
30S ribosomal protein S7
Chain i
30S ribosomal protein S9
Chain j
30S ribosomal protein S10
Chain n
30S ribosomal protein S14

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.1286 s