IL_7P2E_028
3D structure
- PDB id
- 7P2E (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitochondrial ribosome small subunit in complex with IF3, GMPPMP and streptomycin
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- AUAUC*GCCCU
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7P2E_028 not in the Motif Atlas
- Geometric match to IL_4V9F_093
- Geometric discrepancy: 0.1636
- The information below is about IL_4V9F_093
- Detailed Annotation
- C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_63596.13
- Basepair signature
- cWW-cWS-cSH-tWH-cWW-L
- Number of instances in this motif group
- 23
Unit IDs
7P2E|1|A|A|1186
7P2E|1|A|U|1187
7P2E|1|A|A|1188
7P2E|1|A|U|1189
7P2E|1|A|C|1190
*
7P2E|1|A|G|1464
7P2E|1|A|C|1465
7P2E|1|A|C|1466
7P2E|1|A|C|1467
7P2E|1|A|U|1468
Current chains
- Chain A
- 12S mitochondrial rRNA
Nearby chains
- Chain 2
- Coiled-coil-helix-coiled-coil-helix domain-containing protein 1
- Chain F
- 28S ribosomal protein S7, mitochondrial
- Chain G
- 28S ribosomal protein S9, mitochondrial
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