IL_7P48_097
3D structure
- PDB id
- 7P48 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus ribosome in complex with Sal(B)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- ACCU*AGAAGU
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7P48_097 not in the Motif Atlas
- Homologous match to IL_7A0S_104
- Geometric discrepancy: 0.5661
- The information below is about IL_7A0S_104
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_05192.8
- Basepair signature
- cWW-L-R-L-R-L-cWW-L
- Number of instances in this motif group
- 3
Unit IDs
7P48|1|B|A|27
7P48|1|B|C|28
7P48|1|B|C|29
7P48|1|B|U|30
*
7P48|1|B|A|48
7P48|1|B|G|49
7P48|1|B|A|50
7P48|1|B|A|51
7P48|1|B|G|52
7P48|1|B|U|53
Current chains
- Chain B
- 5S rRNA
Nearby chains
- Chain F
- 50S ribosomal protein L5
- Chain M
- 50S ribosomal protein L18
Coloring options: