IL_7P48_167

3D structure

PDB id

7P48 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus ribosome in complex with Sal(B)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GGU*GCC

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7P48_167 not in the Motif Atlas

Geometric match to IL_8AF0_002

Geometric discrepancy: 0.2147

The information below is about IL_8AF0_002

Detailed Annotation

Isolated cWH basepair

Broad Annotation

No text annotation

Motif group

IL_10892.3

Basepair signature

cWW-cHW-cWW

Number of instances in this motif group

61

Unit IDs

7P48|1|A|G|1760
7P48|1|A|G|1761
7P48|1|A|U|1762
*
7P48|1|A|G|1767
7P48|1|A|C|1768
7P48|1|A|C|1769

Current chains

Chain A

23S rRNA

Nearby chains