IL_7P48_172

3D structure

PDB id

7P48 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus ribosome in complex with Sal(B)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GUGG*CCC

Length

7 nucleotides

Bulged bases

7P48|1|a|U|1060

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7P48_172 not in the Motif Atlas

Homologous match to IL_4LFB_043

Geometric discrepancy: 0.2364

The information below is about IL_4LFB_043

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7P48|1|a|G|1059
7P48|1|a|U|1060
7P48|1|a|G|1061
7P48|1|a|G|1062
*
7P48|1|a|C|1217
7P48|1|a|C|1218
7P48|1|a|C|1219

Current chains

Chain a

16S rRNA

Nearby chains

Chain c

30S ribosomal protein S3

Chain n

30S ribosomal protein S14 type Z