IL_7P7Q_008
3D structure
- PDB id
- 7P7Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. faecalis 70S ribosome bound by PoxtA-EQ2, high-resolution combined volume
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- CUGAGUAG*CGAAACG
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7P7Q_008 not in the Motif Atlas
- Homologous match to IL_4WF9_009
- Geometric discrepancy: 0.0695
- The information below is about IL_4WF9_009
- Detailed Annotation
- 8x7 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_62167.4
- Basepair signature
- cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 16
Unit IDs
7P7Q|1|A|C|240
7P7Q|1|A|U|241
7P7Q|1|A|G|242
7P7Q|1|A|A|243
7P7Q|1|A|G|244
7P7Q|1|A|U|245
7P7Q|1|A|A|246
7P7Q|1|A|G|247
*
7P7Q|1|A|C|255
7P7Q|1|A|G|256
7P7Q|1|A|A|257
7P7Q|1|A|A|258
7P7Q|1|A|A|259
7P7Q|1|A|C|260
7P7Q|1|A|G|261
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 7
- 50S ribosomal protein L35
- Chain O
- 50S ribosomal protein L15
Coloring options: