IL_7P7Q_024

3D structure

PDB id

7P7Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. faecalis 70S ribosome bound by PoxtA-EQ2, high-resolution combined volume

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

UGAAG*UGGAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7P7Q_024 not in the Motif Atlas

Geometric match to IL_4V9F_027

Geometric discrepancy: 0.087

The information below is about IL_4V9F_027

Detailed Annotation

Triple sheared

Broad Annotation

No text annotation

Motif group

IL_15190.3

Basepair signature

cWW-tSH-tHS-tHS-cWW

Number of instances in this motif group

26

Unit IDs

7P7Q|1|A|U|742
7P7Q|1|A|G|743
7P7Q|1|A|A|744
7P7Q|1|A|A|745
7P7Q|1|A|G|746
*
7P7Q|1|A|U|763
7P7Q|1|A|G|764
7P7Q|1|A|G|765
7P7Q|1|A|A|766
7P7Q|1|A|G|767

Current chains

Chain A

23S rRNA

Nearby chains

Chain G

50S ribosomal protein L2