IL_7P7Q_029

3D structure

PDB id

7P7Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. faecalis 70S ribosome bound by PoxtA-EQ2, high-resolution combined volume

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

AG*UAU

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7P7Q_029 not in the Motif Atlas

Geometric match to IL_7A0S_024

Geometric discrepancy: 0.2423

The information below is about IL_7A0S_024

Detailed Annotation

90 degree turn

Broad Annotation

90 degree turn

Motif group

IL_79144.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

3

Unit IDs

7P7Q|1|A|A|887
7P7Q|1|A|G|888
*
7P7Q|1|A|U|970
7P7Q|1|A|A|971
7P7Q|1|A|U|972

Current chains

Chain A

23S rRNA

Nearby chains

Chain 2

50S ribosomal protein L30